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Pinned

  1. phylotoast phylotoast Public

    Tools for phylogenetic data analysis including visualization and cluster-computing support.

    Python 12 4

  2. kraken-biom kraken-biom Public

    Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).

    Python 44 15

  3. PyMGRAST PyMGRAST Public

    A python interface to the MG-RAST API including executable scripts providing higher level functionality. Designed to utilize the resources of the Ohio Supercomputer Center (www.osc.edu), but can be…

    Python 3 1

  4. find find Public

    Flow Investigation using N-Dimensions (FIND) is a program designed for analysis and visualization of Flow Cytometry data. FIND focuses specifically on automated population discovery (clustering) me…

    Python 2

  5. ProkaryMetrics ProkaryMetrics Public

    Visualize and analyze 3D biofilm data from fluorescent micrographs

    Python 1

  6. kraken kraken Public

    Forked from DerrickWood/kraken

    Kraken taxonomic sequence classification system

    C++