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Srikrishnan-etal-2024_TBD

Sources of Overconfidence for Agent-Based Models Parameterized by Point Estimates

V. Srikrishnan^1*, P. Bhaduri¹, J. Yoon², B. Daniel² and D. Judi²

¹ Department of Biological & Environmental Engineering, Cornell University, Ithaca, NY, USA ² Pacific Northwest National Laboratory, Richland, WA, USA

* corresponding author: viveks@cornell.edu

Abstract

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Journal reference

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Code reference

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Data reference

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Input data

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Output data

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Dependencies

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Package	Version	Repository Link	DOI
dependency 1	version	--	--
dependency 2	version	link to code repository	link to DOI of release

Contributing modeling software

If your experiment used models from another repository, link to those repositories here.

Model	Version	Repository Link	DOI
CHANCE-C	1.0	https://github.com/DOE-ICoM/chance-c-v1	link to DOI of release

How to reproduce the experiment

This section should consist of a walkthrough of how to reproduce your experiment. This should be a complete set of steps, starting from installing any necessary models and downloading data, and including which scripts to run for each piece of the experiment. If your code was written to work on a particular HPC environment (including the queue manager), document that here. If you had to manually make any adjustments that aren't captured by your code, document them here as well.

1. Install the software components required to conduct the experiment from Contributing modeling software
2. Download and install the supporting input data required to conduct the experiment from Input data
3. Run the following scripts in the workflow directory to run my experiment:

Script Name	Description	How to Run
step_one.jl	Script to run the first part of my experiment	julia step_one.jl
step_two.jl	Script to run the last part of my experiment	julia step_two.jl

4. Download and unzip the output data from my experiment Output data
5. Run the following scripts in the workflow directory to compare my outputs to those from the publication

Script Name	Description	How to Run
compare_outputs.jl	Script to compare my outputs to the original	julia compare_outputs.jl

Reproduce paper figures

Use the scripts found in the figures directory to reproduce the figures used in this publication. It might be best practice to separate these scripts for each figure (or batch of figures) to improve readability and facilitate debugging.

Script Name	Description	How to Run
generate_hindcast.jl	Script to generate a hindcast	julia generate_hindcast-jl