EPACTS is a versatile software pipeline to perform various statistical tests for identifying genome-wide association from sequence data through a user-friendly interface, both to scientific analysts and to method developer.s
Prerequisite Packages
- zlib
- ghostscript
- R-studio
- groff
- gnuplot
- automake
Installing these packages on Centos:
$ sudo yum install epel-release $ sudo yum update $ sudo yum install zlib ghoshcript R groff gnuplot automake -y
Initialize the autoreconf program:
$ autoreconf -f -i
You can clone the current snapshot of this repository to install as well
$ git clone https://github.com/statgen/EPACTS.git $ cd EPACTS $ ./configure --prefix [/path/to/install] $ make $ make install
The latest version of documentation of EPACTS can be found at http://genome.sph.umich.edu/wiki/EPACTS
Feel free to contact Hyun Min Kang (hmkang@umich.edu) or joint EPACTS Google group (http://groups.google.com/group/epacts) to ask questions about EPACTS