allelic-imbalance

Here are 2 public repositories matching this topic...

deepomicslab / SpecHLA

SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read data.

nanopore cancer phase immunity hla-typing pacbio-data local-assembly loh haplotype reads-binning hla-sequence loss-of-heterozygosity genotype-frequency allelic-imbalance human-leukocyte-antigens

Updated Jun 14, 2024
C++

gitikabhardwaj / Genomic-Data-Exploration-Visualizing-Genetic-Variants-and-Allelic-Imbalance

Star

Advanced bioinformatics analysis of RNA sequencing data and genomic databases using R. Explore allelic imbalances, SNP variants, and phylogenetic trees to uncover genetic insights and visualize complex data interactions.

bioinformatics r snps computational-biology data-visualization phylogenetics rnaseq genetic-analysis genetic-variants genomics-data allelic-imbalance

Updated May 30, 2024
R

Improve this page

Add a description, image, and links to the allelic-imbalance topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the allelic-imbalance topic, visit your repo's landing page and select "manage topics."

Learn more

Provide feedback

Saved searches

Use saved searches to filter your results more quickly