NanoTrackJ is an ImageJ/Fiji plugin to characterize the size of nanoparticles by its diffusion trajectories.
A Matlab code for tracking colloidal fluorescent nanoparticles.
Repository for the KCN etching of gold nanorods paper
Paper on how to supress background while imaging gold nanorods through the use of the anti-Stokes emission.
eNanoMapper TTL for ACS Nano paper
"aggregate_gen" -- An efficient C++ code for generating fractal cluster of spheres
High throughput analysis of NTA data to evaulate particle interaction. Also gives results of general NTA analysis
This repository contains examples of genetic algorithm optimisations using the Organisms program that can be run on Jupyter. This can be run either on your computer or live on the web through Binder
The Nanocluster interpolation Scheme Program (NISP) is designed to perform an interpolation scheme that gives idea of the types of icosahedral, decahedral, and octahedral clusters that may exist at selected sizes.
Python Code for Processing LAMMPS Data generated for two data types: LAMMPS trajectory file and LAMMPS dump files. Subsequently, the code involves post-processing of the data to give interfacial heat flux, temperature discontinuity and ultimately interfacial conductance using the atomistic nodal approach. Pythode code is also presented as a work…
PBPK Modeling For Therapeutic Nanoparticles Loaded With Drug
Free and open-source code package designed to perform PyMEEP FDTD simulations applied to Plasmonics (UBA+CONICET) [Buenos Aires, Argentina]
Depolarized Dynamic Light Scattering data analysis in python. Used to find aspect ratio of non-spherical nanoparticles using oblate, prolate, and cylinder methods.
Scripts to compute field enhancements of plasmonic nanostrucutres, mirrored from https://gitlab.com/theoretical-chemistry-jena/quantum-dynamics/plasmonic-meep/
Analyze two-component nanoparticle properties for classical molecular dynamics simulations
A molecular dynamics approach to study the permeation of nanoparticles through lipid bilayer
PAR2 Activation and calcium signaling Reaction Model in PySB
Using deep learning methods to recognize and measure silica spheres in SEM pictures.
project about measuring size and shape of gold nanoparticles and nanorods and image segmantation
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