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save finite volume simulation results as zarr #1162

Merged
merged 8 commits into from May 6, 2024
Merged

save finite volume simulation results as zarr #1162

merged 8 commits into from May 6, 2024

Commits on May 2, 2024

  1. read FiniteVolume data and write data to Zarr store

    @jcschaff
    jcschaff committed May 2, 2024
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  2. improve jupyter notebook

    @jcschaff
    jcschaff committed May 2, 2024
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  3. added 3D plot to jupyter notebook

    @jcschaff
    jcschaff committed May 2, 2024
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  4. add lots of metadata, region masks and stats

    @jcschaff
    jcschaff committed May 2, 2024
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  5. add time plot to notebook

    @jcschaff
    jcschaff committed May 2, 2024
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  6. read post-processing from hdf5 - var statistics and microscopy data

    @jcschaff
    jcschaff committed May 2, 2024
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Commits on May 6, 2024

  1. make vcelldata python package Python 3.9+ friendly, add to Github CI/CD

    @jcschaff
    jcschaff committed May 6, 2024
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  2. switch to jupyterlab and rerun vcelldata notebook to render in github

    @jcschaff
    jcschaff committed May 6, 2024
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