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249 followers · 44 following

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Galaxy BrainAchievement: Starstruckx2Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3
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Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Galaxy BrainAchievement: Starstruckx2Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3
BetaSend feedback

Highlights

  • Pro

Organizations

@bioconda @centre-for-microbiome-research @emerge-bii
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Pinned

  1. CoverM CoverM Public

    Read coverage calculator for metagenomics

    Rust 255 30

  2. kingfisher-download kingfisher-download Public

    Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.

    Python 225 37

  3. singlem singlem Public

    Novelty-inclusive microbial community profiling of shotgun metagenomes

    Python 105 15

  4. rhysnewell/Lorikeet rhysnewell/Lorikeet Public

    Strain resolver for metagenomics

    Rust 64 9

  5. galah galah Public

    More scalable dereplication for metagenome assembled genomes

    Rust 44 10

  6. rhysnewell/aviary rhysnewell/aviary Public

    A hybrid assembly and MAG recovery pipeline (and more!)

    Python 67 10