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v0.6.0

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@proycon proycon released this 15 Mar 18:04
· 62 commits to master since this release

This release introduces some major refactoring, many fixes, and some new tools:

  • Upgraded to use stam-rust v0.11.0
  • stam align: tool that aligns identical parts of two (sub)texts using Smith Waterman/Needleman Wunsch. Outputs a transposition following the STAM Transpose specification.
  • stam transpose: new tool implementing the ability to map annotations from one coordinate system to another, given a transposition (e.g. like produced by stam align).
  • stam export: added --alignments parameter that outputs transpositions in TSV format
  • stam batch or stam shell: a tool to invoke stam tools subcommands in sequence. his is a good way to avoid the initialization/serialisation overhead that would normally come from invoking commands one-by-one on the command line. It also works for (limited) interactive use.
  • Loading and merging multiple annotation stores was revised, fixed and applied more consistently across all tools.
  • stam view: Fixes in newline visualisation and added --collapse parameter to hide tags when first loading html.

Removed:

  • stam save is no longer needed, just use stam init / stam annotate.