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Beginning infrastructure for Vecchia GP's #2311

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Beginning infrastructure for Vecchia GP's #2311

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Commits on Nov 1, 2022

  1. First commit for Vecchia module of GPyTorch, implementing a Vecchia-a… 

    …pproximated MVN distribution, a Vecchia MLL wrapper to apply any MLL to small blocks of data with the VeccMVN distribution, and a Block class to perform the data blocking functionality, keep track of block order, neighbors, and constructing testing data blocks and neighbors.
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  2. Update Block to handle 0 neighbors, change names in error messages fr… 

    …om Block to Vecc.
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Commits on Nov 3, 2022

  1. Fix bug in prediction code.

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    alexpeters1208 committed Nov 3, 2022
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Commits on Nov 4, 2022

  1. Update documentation in Block.py.

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    alexpeters1208 committed Nov 4, 2022
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  2. Update more documentation in Block.py.

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    alexpeters1208 committed Nov 4, 2022
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Commits on Nov 8, 2022

  1. Merge branch 'cornellius-gp:master' into master

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Commits on Nov 11, 2022

  1. Begin refactoring of Block class to enable flexible blocking.

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    alexpeters1208 committed Nov 11, 2022
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  2. Merge branch 'master' of https://github.com/alexpeters1208/gpytorch

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    alexpeters1208 committed Nov 11, 2022
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Commits on Nov 17, 2022

  1. Decouple blocking machinery from k-means implementation with Abstract… 

    …Blocker.
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    alexpeters1208 committed Nov 17, 2022
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  2. Modify KMeansBlocker and mean, covariance function.

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    alexpeters1208 committed Nov 17, 2022
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  3. Conform AbstractBlocker to PEP.

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    alexpeters1208 committed Nov 17, 2022
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Commits on Nov 23, 2022

  1. Remove blocking and ordering strategies to simplify interface and ali… 

    …gn with variational module style.
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    alexpeters1208 committed Nov 23, 2022
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  2. Merge branch 'cornellius-gp:master' into master

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    alexpeters1208 committed Nov 23, 2022
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Commits on Nov 30, 2022

  1. Merge branch 'cornellius-gp:master' into master

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Commits on Dec 15, 2022

  1. Add temporary ordering strategies.

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Commits on Jan 9, 2023

  1. Merge branch 'cornellius-gp:master' into master

    @alexpeters1208
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  2. Add ordering strategies, modify blocking objects to make use of order… 

    …ing strategies and enable reordering.
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Commits on Jan 17, 2023

  1. Merge branch 'cornellius-gp:master' into master

    @alexpeters1208
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  2. Merge remote-tracking branch 'origin/master'

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  3. Include type hinting in base blocker class.

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  4. Include type hinting in base blocker class.

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    alexpeters1208 committed Jan 17, 2023
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  5. Merge branch 'master' of https://github.com/alexpeters1208/gpytorch

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  6. Continue type hinting in BaseBlocker and KMeansBlocker, add documenta… 

    …tion, add new ordering strategies.
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Commits on Jan 18, 2023

  1. Create plotting method for blocking object.

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    alexpeters1208 committed Jan 18, 2023
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Commits on Jan 19, 2023

  1. Begin example notebook for using blocking object.

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  2. Continue example notebook for blocking object.

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    alexpeters1208 committed Jan 19, 2023
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  3. Continue example notebook for blocking object.

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    alexpeters1208 committed Jan 19, 2023
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Commits on Jan 20, 2023

  1. Update KMeansBlocker docstring.

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    alexpeters1208 committed Jan 20, 2023
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  2. Continue tutorial, update docstrings.

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    alexpeters1208 committed Jan 20, 2023
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  3. Continue tutorial, update docstrings.

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    alexpeters1208 committed Jan 20, 2023
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  4. Continue tutorial.

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  5. Continue tutorial.

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Commits on Jan 31, 2023

  1. Modify docstrings, add to tutorial, refactor K-Means blocker to reduc… 

    …e repetition, add first draft of VoronoiBlocker.
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  2. Continue tutorial.

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Commits on Feb 2, 2023

  1. Refactor all blockers and update tutorial.

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Commits on Mar 6, 2023

  1. Create new approaches to ordering strategies and add parametrized dis… 

    …tance metrics. Both have two approaches and at most one of them should be final. Update tutorials and blockers accordingly.
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  2. Create new approaches to ordering strategies and add parametrized dis… 

    …tance metrics. Both have two approaches and at most one of them should be final. Update tutorials and blockers accordingly.
    @alexpeters1208
    alexpeters1208 committed Mar 6, 2023
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  3. Update tutorial and remove type constraint on distance metrics.

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    alexpeters1208 committed Mar 6, 2023
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Commits on Mar 15, 2023

  1. Add first unit test for blocker and refactor blocker.

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  2. Merge latest GPyTorch master into my fork. Crossing my fingers...

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  3. Update blocker docs.

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    alexpeters1208 committed Mar 15, 2023
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Commits on Mar 16, 2023

  1. Merge branch 'cornellius-gp:master' into master

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Commits on Mar 20, 2023

  1. Update blocker unit tests.

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Commits on Mar 23, 2023

  1. Update blocker, add unit testing for K-Means blocker and Vecchia bloc… 

    …ker.
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Commits on Mar 24, 2023

  1. Delete files not directly related to blockers for PR.

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Commits on Mar 27, 2023

  1. Change all names from Blocker to Index.

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  2. Delete blocking tutorial.

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    alexpeters1208 committed Mar 27, 2023
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  3. Update Vecchia rst and update names from Blocker to Index.

    @alexpeters1208
    alexpeters1208 committed Mar 27, 2023
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  4. Update docs to eliminate warnings.

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    alexpeters1208 committed Mar 27, 2023
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  5. Update names in Vecchia mean and covariance function.

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    alexpeters1208 committed Mar 27, 2023
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  6. Remove matplotlib dependency and move plotting code into example note… 

    …book.
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Commits on May 26, 2023

  1. Merge branch 'cornellius-gp:master' into blockers

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Commits on Sep 14, 2023

  1. Merge branch 'cornellius-gp:master' into blockers

    @alexpeters1208
    alexpeters1208 committed Sep 14, 2023
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  2. Renaming / moving stuff around from Geoff's suggestions

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    alexpeters1208 committed Sep 14, 2023
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  3. Refactor unit tests with rename

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    alexpeters1208 committed Sep 14, 2023
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Commits on Sep 21, 2023

  1. Rename vecchia to nearest_neighbors in docs

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    alexpeters1208 committed Sep 21, 2023
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Commits on Nov 15, 2023

  1. Merge branch 'cornellius-gp:master' into blockers

    @alexpeters1208
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  2. Add FAISS to docs requirements

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  3. Add FAISS to docs requirements again

    @alexpeters1208
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  4. Add FAISS to docs requirements yet again

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  5. Trying again

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  6. Maybe fix build problem?

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  7. Modify conf.py for build problem, this should not be the case

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  8. Update examples index

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    alexpeters1208 committed Nov 15, 2023
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  9. Update docs labels

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    alexpeters1208 committed Nov 15, 2023
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  10. Fix hyperlink

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    alexpeters1208 committed Nov 15, 2023
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  11. Modify notebook

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Commits on Dec 30, 2023

  1. Merge branch 'cornellius-gp:master' into blockers

    @alexpeters1208
    alexpeters1208 committed Dec 30, 2023
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