Skip to content

metaboMisc 0.6.0
Compare
Choose a tag to compare
@jasenfinch jasenfinch released this 23 Feb 20:26
· 21 commits to master since this release
v0.6.0
f90ef3d
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Learn about vigilant mode.

  • injOrder is now the default column for sample indexes returned from detectMissInjections().

  • The returned miss injection indexes are now sorted.

  • Fixed the MetaboProfile S4 class export() method for GC-MS techniques.

  • Added the strategy and workers arguments in suitableParallelPlan() to allow the manual selection of parallel options.

  • Added an export() method for the Construction S4 class.

  • detectModellingParameters() now returns parameters for unsupervised random forest when a single class response is specified.

  • Added miss_injections and batch_correction arguments to detectPretreatmentParameters() to specify if miss injection detection and/or batch correction detection is performed.

  • The RSDthresh parameter is now set by detectPretreatmentParameters() for the MetaboProfile S4 class depending on the technique used.

  • Miss injections are now detected below a percentage threshold of the median total ion count in detectMissInjections().

  • Added the isotopic_adducts argument to reduce() to allow the removal of m/z features assigned isotopic adducts.

  • The row order of the output of convertSampleInfo() will now always match the row order of the input.

  • Added the user_text argument to convertSampleInfo() to denote the column names for the User text fields.

Assets 2