Web-based molecule sketcher

A Python module to calculate alignment between two sequences using EMBOSS' needle, stretcher, and water

Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif

🍣 🦐 A lightweight nucleotide bacterial ortholog clustering tool

This is one of my first python scripts for a simple web-based tool that will generate basic information from the query DNA sequence.

The active development version of the degenerate bases algorithm.

Random DNA 🧬 nucleotide generator and reverse compliment finder 🔬

Swift package for bioinformatics

Protein to RNA reverse translation

Basically BLAST, but written in PostgreSQL😉

Analysis of FASTA ,Protein,DNA sequence.

Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)

DNA or RNA complementary, reverse and reverse complementary sequences generator

Needleman–Wunsch algorithm implementation in Go.

API repo: https://github.com/shamseen/pngcat-api

a Python program to calculate GC content from fasta file

BIAP - A website that serves as a tool to analyze biological data (nucleotide and aminoacid sequences) and provide biology-related information in one place.

This program determines the optimal alignment of two nucleotide sequences using the Smith–Waterman algorithm. Optimality, of course, is determined by the values of the gap penalty g and the weight matrix (that lists all of the s(ai , bj )). Finally the program outputs the optimal similarity score along with the optimal alignment.

Filter fasta sequences by length

A webserver for calculating the transition/transversion mutation ratio from input nucleotide sequences.