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Describe your problem
I wasn't able to start napari from the conda environment installed by RELION-5 following the instructions (see error message below). However, a clean installation of a conda environment just for napari with pyqt from conda-forge following the official instructions works fine. I managed to get it working by modifying the relion-5.0 environment specification (see below).
Please cite the full error message as the example below.
WARNING: Could not load the Qt platform plugin "xcb" in "" even though it was found.
16:31:38 WARNING Could not load the Qt platform plugin "xcb" in "" even though it was found.
WARNING: This application failed to start because no Qt platform plugin could be initialized. Reinstalling the application may fix this problem.
Available platform plugins are: eglfs, linuxfb, minimal, minimalegl, offscreen, vnc, wayland-egl, wayland, wayland-xcomposite-egl, wayland-xcomposite-glx, webgl, xcb.
16:31:38 WARNING This application failed to start because no Qt platform plugin could be initialized. Reinstalling the application may fix this problem.
Available platform plugins are: eglfs, linuxfb, minimal, minimalegl, offscreen, vnc, wayland-egl, wayland, wayland-xcomposite-egl, wayland-xcomposite-glx, webgl, xcb.
Aborted (core dumped)
I managed to solve the problem in my system by modifying the environment.yml file as follows:
Describe your problem
I wasn't able to start napari from the conda environment installed by RELION-5 following the instructions (see error message below). However, a clean installation of a conda environment just for napari with pyqt from
conda-forge
following the official instructions works fine. I managed to get it working by modifying therelion-5.0
environment specification (see below).Environment:
Job options:
Error message:
Please cite the full error message as the example below.
I managed to solve the problem in my system by modifying the
environment.yml
file as follows:I can submit a PR but first I'd like to check if this is a reasonable fix. Also not sure about which versions to pin for napari and pyqt in this case.
Thanks!
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