local_symmetry.cpp (global search)

[rfronzes]

I am currently trying to use local symmetry in relion.
I follow the information provided in the wiki.Unfortunately I am stuck at the first step (global search of operators).

relion_localsym --search --i_map 3D-final.mrc --i_op_mask_info init_masklist.star --o_mask_info maskinfo_iter000.star --angpix 1.24 --ang_step 5

the error message I get:
ERROR:
ERROR: Cannot open file: maskinfo.txt
File: /home/gerald/relion/src/local_symmetry.cpp line: 209

My file init_masklist.star
data_
loop_
_rlnMaskName #1
_rlnAreaId #2
mask-t1-m1.mrc 1
mask-t1-m2.mrc 1
mask-t1-m3.mrc 1
mask-t2-m1.mrc 2
mask-t2-m2.mrc 2
mask-t2-m3.mrc 2

I checked with chimera that the masks provided are aligned with the 3D (same box size, etc)

Best

Rémi

[biochem-fan]

Too old issue; perhaps CR+LF caused the issue?