This is the documentation repository for ongoing releases to the NDA collection 3165. Please add GitHub Issues here for requests or feedback.
This repository contains the statistic scripts (.R) for running the worked examples in the paper "Meaningful Associations in the Adolescent Brain Cognitive Development Study"
Tool for downloading ABCD_BIDS inputs and derivatives from the ABCD-BIDS NDA Collection 3165.
Data upload site for FIONA site computer
Collection of scripts to analyze ABCD release data
scripts that extract task timing and behavioral metrics
Contains scripts (internal and external) for creating abcd_imgincl csv file
For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.
The Structure of Cognition in 9 and 10 year-old Children and Associations with Problem Behaviors: Findings from the ABCD Study’s Baseline Neurocognitive Battery.
Exporting REDCap data dictionaries and data to the NIMH National Data Archive (NDA)
GFA for SES measures
Convert E-Prime generated files (exported as csv) to propper CSV
How to calculate raked propensity scores for the ABCD Study cohort
bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
Visual programming to calculate derived scores for REDCap
If this then that like framework for emails - great for studies with many users that all want to receive reports
Contains processing, direct alert generation, and scoring logic for ABCD Fitbit data
A framework for adding gelocation derived data to the ABCD study.
iPhone application to help identify participants for onsite visits
A basic ABCD development environment running ubuntu, apache2 and php7
Graphical visualization of the visit structure in a longitudinal project
Material collection for the ABCD-DAIC workshops on data science
Change the name of REDCap items in an existing project and attempt to rewrite the projects history.
REDCap extension module: Colors each row of an instrument - if a value has been provided. This will highlight rows with missing values to improve their visibility.
Scripts to enable vertex-wise (CIFTI) analysis of ABCD with FSL/PALM and HCP Workbench
Sends out information about ABCD on Discord
Online timeline-followback subject test