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fixing doctest
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ACEnglish committed Feb 21, 2024
1 parent ca5acf9 commit b52ef81
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion truvari/msatovcf.py
Original file line number Diff line number Diff line change
Expand Up @@ -142,7 +142,7 @@ def msa2vcf(msa, anchor_base='N'):
>>> import truvari
>>> from truvari.phab import fasta_reader
>>> msa_dir = "repo_utils/test_files/external/fake_mafft/lookup/"
>>> msa_file = "fm_7bb50c57d657828978076072c80f8a1f.msa"
>>> msa_file = "fm_92be9763c7114fd6ce736a7008114ad0.msa"
>>> seqs = open(msa_dir + msa_file).read()
>>> fasta = dict(fasta_reader(seqs))
>>> m_entries_str = truvari.msa2vcf(fasta)
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