Name		Name	Last commit message	Last commit date
Latest commit History 69 Commits
1.sickle.sh		1.sickle.sh
1.trimmomatic.sh		1.trimmomatic.sh
10.F3_hmmer_orf.sh		10.F3_hmmer_orf.sh
11.F3_blastp.sh		11.F3_blastp.sh
12.F3_blastn.sh		12.F3_blastn.sh
13.Remove_Protein.R		13.Remove_Protein.R
14.bedtofasta		14.bedtofasta
15.blastn_hgncrna		15.blastn_hgncrna
16.ExtractBlastnResults		16.ExtractBlastnResults
17.final_lncrna		17.final_lncrna
2.genome_index.sh		2.genome_index.sh
3.star_pass1.sh		3.star_pass1.sh
4.star_pass2.sh		4.star_pass2.sh
5.stringtie.sh		5.stringtie.sh
6.1.F1F2_make_bed.sh		6.1.F1F2_make_bed.sh
6.2_exclude_se.R		6.2_exclude_se.R
7.F1F2_filter_tpm_length.sh		7.F1F2_filter_tpm_length.sh
8.F3_getfasta.sh		8.F3_getfasta.sh
9.F3_orf.sh		9.F3_orf.sh
AH1_Liver_Ribozero_lncRNA_final.bed		AH1_Liver_Ribozero_lncRNA_final.bed
AH1_Liver_lncRNA_final.bed		AH1_Liver_lncRNA_final.bed
AH1_PC_Ribozero_lncRNA_final.bed		AH1_PC_Ribozero_lncRNA_final.bed
AH1_PC_lncRNA_final.bed		AH1_PC_lncRNA_final.bed
AH2_Liver_Ribozero_lncRNA_final.bed		AH2_Liver_Ribozero_lncRNA_final.bed
AH2_Liver_lncRNA_final.bed		AH2_Liver_lncRNA_final.bed
AH2_PC_Ribozero_lncRNA_final.bed		AH2_PC_Ribozero_lncRNA_final.bed
AH2_PC_lncRNA_final.bed		AH2_PC_lncRNA_final.bed
README.md		README.md

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