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@AMR-Hackathon-2021

AMR Hackathon 2021

PHA4GE, JPIAMR and CLIMB-BIG-DATA joint initiative
README.md

Hi there 👋

🙋‍♀️ This is the GitHub Organization of the PHA4GE, JPIAMR and CLIMB-BIG-DATA joint Hackathon on Antimicrobial Resistance (11-13 October 2021)
📌 The aim of this hackathon is to improve upon/build/extend bioinformatics tools and methods for the AMR community. This year’s hackathon has a special focus on antimicrobial resistance in bacteria.

Steering group 

Andrew Page, Quadram Institute, UK, representing CLIMB-BD and PHA4GE
Emma Griffiths, SFU, Canada, representing PHA4GE
Mark Pallen, Quadram Institute, UK, representing CLIMB-BD
Lisa Marchioretto, Quadram Institute, UK, representing CLIMB-BD
Finlay Maguire, Dalhousie University, Canada, representing PHA4GE
Jessica Boname, MRC, UK, representing JPIAMR and MRC

Popular repositories Loading

  1. benchmarking_datasets benchmarking_datasets Public

    Python 4 3

  2. gpu_kmer_counter gpu_kmer_counter Public

    CUDA application to count k-mers in reads using a GPU

    Cuda 1

  3. .github .github Public

  4. long-reads long-reads Public

    AMR detection in uncorrected long reads

    Python 1

Repositories

Showing 4 of 4 repositories
  • benchmarking_datasets Public
    AMR-Hackathon-2021/benchmarking_datasets’s past year of commit activity
    Python 4 GPL-3.0 3 6 0 Updated May 12, 2022
  • gpu_kmer_counter Public

    CUDA application to count k-mers in reads using a GPU

    AMR-Hackathon-2021/gpu_kmer_counter’s past year of commit activity
    Cuda 1 Apache-2.0 0 2 0 Updated Nov 4, 2021
  • long-reads Public

    AMR detection in uncorrected long reads

    AMR-Hackathon-2021/long-reads’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Oct 18, 2021
  • .github Public
    AMR-Hackathon-2021/.github’s past year of commit activity
    0 0 0 0 Updated Oct 8, 2021

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