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@ActiveBrainAtlas2

Active Brain Atlas

Active Brain Atlas Project

Pinned

  1. abakit abakit Public

    This repository contains methods for use in the Django database portal and the image processing pipeline.

    Python

  2. activebrainatlasadmin activebrainatlasadmin Public

    This is the ActiveBrainAtlas database portal. This project provides the admin area to edit data associated with the Active Brain Atlas project. It also provides the REST API.

    Jupyter Notebook 1

  3. neuroglancer neuroglancer Public

    The ActiveBrainAtlas fork of the Neuroglancer project. This fork includes all the functionality of the main branch plus our REST API database integration.

    TypeScript 1

  4. preprocessing-pipeline preprocessing-pipeline Public

    This repository contains the code for the image processing sequence. Starting from the raw images from the scanner through the generation of the tiled images for Neuroglancer.

    Jupyter Notebook 1 3

Repositories

Showing 8 of 8 repositories
  • neuropixels_trajectory_explorer Public
    MATLAB 0 GPL-3.0 0 0 0 Updated Dec 15, 2023
  • preprocessing-pipeline Public

    This repository contains the code for the image processing sequence. Starting from the raw images from the scanner through the generation of the tiled images for Neuroglancer.

    Jupyter Notebook 1 3 1 14 Updated Oct 6, 2023
  • neuroglancer Public

    The ActiveBrainAtlas fork of the Neuroglancer project. This fork includes all the functionality of the main branch plus our REST API database integration.

    TypeScript 0 Apache-2.0 1 0 0 Updated Jun 9, 2023
  • activebrainatlasadmin Public

    This is the ActiveBrainAtlas database portal. This project provides the admin area to edit data associated with the Active Brain Atlas project. It also provides the REST API.

    Jupyter Notebook 0 1 57 13 Updated Jun 2, 2023
  • nwb Public

    Conversion tools for Data Conversion and Curation into NWB format

    Python 0 MIT 0 0 0 Updated May 15, 2023
  • abakit Public

    This repository contains methods for use in the Django database portal and the image processing pipeline.

    Python 0 MIT 0 0 0 Updated Apr 22, 2023
  • cell_extractor Public
    Python 1 MIT 0 0 0 Updated Jan 19, 2023
  • DKCell Public Forked from samik1986/DKCell

    This is a fork of the CSHL cell detector. It uses tensorflow and keras.

    MATLAB 0 MIT 1 0 0 Updated Jan 17, 2022

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