updating for pypi setup

License.txt

@@ -0,0 +1,7 @@
+Copyright 2017 Aki Nikolaidis
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

setup.cfg

@@ -0,0 +1,2 @@
+[metadata]
+description-file = README.md

setup.py

@@ -1,13 +1,110 @@
-from distutils.core import setup
+"""A setuptools based setup module.
+See:
+https://packaging.python.org/en/latest/distributing.html
+https://github.com/pypa/sampleproject
+"""
+
+# Always prefer setuptools over distutils
+from setuptools import setup, find_packages
+# To use a consistent encoding
+from codecs import open
+from os import path
+
+here = path.abspath(path.dirname(__file__))
+
+# Get the long description from the README file
+with open(path.join(here, 'README.md'), encoding='utf-8') as f:
+    long_description = f.read()
+
 setup(
-  name = 'PyBASC',
-  packages = ['PyBASC'], # this must be the same as the name above
-  version = '0.1',
-  description = 'A random test lib',
-  author = 'Aki Nikolaidis',
-  author_email = 'aki.nikolaidis@childmind.org',
-  url = 'https://github.com/akinikolaidis/pybasc', # use the URL to the github repo
-  download_url = 'https://github.com/peterldowns/mypackage/archive/0.1.tar.gz', # I'll explain this in a second
-  keywords = ['bootstrap', 'clustering', 'fmri'], # arbitrary keywords
-  classifiers = [],
+    name='PyBASC',
+
+    # Versions should comply with PEP440.  For a discussion on single-sourcing
+    # the version across setup.py and the project code, see
+    # https://packaging.python.org/en/latest/single_source_version.html
+    version='0.0.4',
+
+    description='A bootstrapping clustering algorithm for Python',
+    long_description=long_description,
+
+    # The project's main homepage.
+    url='https://github.com/akinikolaidis/pybasc',
+
+    # Author details
+    author='Aki Nikolaidis',
+    author_email='aki.nikolaidis@childmind.org',
+
+    # Choose your license
+    license='MIT',
+
+    # See https://pypi.python.org/pypi?%3Aaction=list_classifiers
+    classifiers=[
+        # How mature is this project? Common values are
+        #   3 - Alpha
+        #   4 - Beta
+        #   5 - Production/Stable
+        'Development Status :: 3 - Alpha',
+
+        # Indicate who your project is intended for
+        'Intended Audience :: Developers',
+        'Topic :: Software Development :: Build Tools',
+
+        # Pick your license as you wish (should match "license" above)
+        'License :: OSI Approved :: MIT License',
+
+        # Specify the Python versions you support here. In particular, ensure
+        # that you indicate whether you support Python 2, Python 3 or both.
+        'Programming Language :: Python :: 3',
+        'Programming Language :: Python :: 3.3',
+        'Programming Language :: Python :: 3.4',
+        'Programming Language :: Python :: 3.5',
+    ],
+
+    # What does your project relate to?
+    keywords='parcellation functional neuroimaging nipype nipy nibabel nilearn scikit-learn',
+
+    # You can just specify the packages manually here if your project is
+    # simple. Or you can use find_packages().
+    packages=find_packages(exclude=['contrib', 'docs', 'tests']),
+
+    # Alternatively, if you want to distribute just a my_module.py, uncomment
+    # this:
+    #   py_modules=["my_module"],
+
+    # List run-time dependencies here.  These will be installed by pip whencd github
+    # your project is installed. For an analysis of "install_requires" vs pip's
+    # requirements files see:
+    # https://packaging.python.org/en/latest/requirements.html
+    install_requires=['nilearn', 'scikit-learn', 'nibabel', 'nipype', 'scipy', 'scipy', 'numpy'],
+
+#    # List additional groups of dependencies here (e.g. development
+#    # dependencies). You can install these using the following syntax,
+#    # for example:
+#    # $ pip install -e .[dev,test]
+#    extras_require={
+#        'dev': ['check-manifest'],
+#        'test': ['coverage'],
+#    },
+
+    # If there are data files included in your packages that need to be
+    # installed, specify them here.  If using Python 2.6 or less, then these
+    # have to be included in MANIFEST.in as well.
+#    package_data={
+#        'sample': ['package_data.dat'],
+#    },
+
+    # Although 'package_data' is the preferred approach, in some case you may
+    # need to place data files outside of your packages. See:
+    # http://docs.python.org/3.4/distutils/setupscript.html#installing-additional-files # noqa
+    # In this case, 'data_file' will be installed into '<sys.prefix>/my_data'
+#    data_files=[('my_data', ['data/data_file'])],
+
+    # To provide executable scripts, use entry points in preference to the
+    # "scripts" keyword. Entry points provide cross-platform support and allow
+    # pip to create the appropriate form of executable for the target platform.
+#    entry_points={
+#        'console_scripts': [
+#            'sample=sample:main',
+#        ],
+#    },
 )