Abbreviation | Description |
---|---|
GC | G and C nucleotides content |
GC1 | G and C nucleotides content at first codon postion |
GC2 | G and C nucleotides content at second codon postion |
GC3 | G and C nucleotides content at third codon postion |
GC12 | G and C nucleotides content at first + second codon postions |
AT | A and T nucleotides content |
AT3 | A and T nucleotides content at third codon position |
A3 | A nucleotides content at third codon position |
T3 | T3 nucleotides content at third codon position |
C3 | C3 nucleotides content at third codon position |
G3 | G3 nucleotides content at third codon position |
GRAVY | General average hydropathicity |
AROMO | Aromaticity |
ENc | Effective number of codons |
CAI | Codon adaptation index |
RSCU | Relative synonymous codon usage |
P2-index | Translational selection index |
PR2-plot | Parity Rule 2 -plot |
CA | Correspondence analysis |