Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

960/ecephys rf metrics #961

Closed
wants to merge 10 commits into from

Conversation

jsiegle
Copy link
Collaborator

@jsiegle jsiegle commented Sep 1, 2019

  • Adds degree conversion methods to RF metrics -- would be helpful if @jiaxx and @saskiad can check these functions
  • No tests yet...can @kaeldai help with this?

Closes #960

@kaeldai
Copy link
Contributor

kaeldai commented Sep 1, 2019

@jsiegle - did the value of the metrics change or did you just reactor some code?

If all you did was some refactoring then we can run the unit tests and they should all pass, since they already include check for the receptive field values. However you'll have to wait because the unit tests have not been merged into internal.

@jsiegle
Copy link
Collaborator Author

jsiegle commented Sep 1, 2019

@kaeldai yes, the outputs will change. The original metrics were in units of pixels (0-8) and now they are in units of degrees relative to the mouse's center of gaze.

kaeldai and others added 3 commits September 3, 2019 11:16
…into 960/ecephys_rf_metrics

Conflicts:
	allensdk/brain_observatory/ecephys/stimulus_analysis/receptive_field_mapping.py
@kaeldai
Copy link
Contributor

kaeldai commented Sep 6, 2019

@jsiegle - do you want to close this PR, #973 should include all the changes + updated tests.

@jsiegle jsiegle closed this Sep 6, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants