Add tool for reviewing specific lists of pairs

tools/pair_analysis_list.py

@@ -0,0 +1,50 @@
+import os, sys, subprocess, time, re
+
+argv = sys.argv[1:]
+
+usage = """
+Run pair_analysis.py on a list of pair IDs
+Usage:  python pair_analysis_list.py expt_id1 pre_cell_id1 post_cell_id1 ...
+or      python pair_analysis_list.py - 
+ (in the second case, send pair IDs via stdin, one ID per line)
+"""
+
+if len(argv) == 0:
+    print(usage)
+    sys.exit(0)
+
+def get_next_pair():
+    global argv
+    if len(argv) == 0:
+        return None
+    if argv[0] == '-':
+        while True:
+            line = sys.stdin.readline()
+            if line == '':
+                return None
+            if '#' in line:
+                line = line.partition('#')[0]
+            line = line.strip()
+            if len(line) == 0:
+                continue
+            return re.split(r'\s+', line)
+    else:
+        return (argv.pop(0), argv.pop(0), argv.pop(0))
+
+
+procs = []
+pa_script = os.path.join(os.path.dirname(__file__), 'pair_analysis.py')
+
+
+while True:
+    if len(procs) < 2:
+        syn_id = get_next_pair()
+        if syn_id is not None:
+            proc = subprocess.Popen(['python', pa_script, syn_id[0], syn_id[1], syn_id[2]])
+            procs.append(proc)
+    # remove finished processes from list
+    procs = [p for p in procs if p.poll() is None]
+    time.sleep(0.1)
+
+    if len(procs) == 0:
+        break