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From Voxel To Coordinates #49
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Can you explain in more detail what you mean by "coordinates in a given reference frame"? |
Hi, Thanks for getting back to me and sorry if my question wasn't too clear, I'll try to rephrase it. What I meant is this, the I hope the question is a bit more clear now. I guess in general I am confused about the shape and number of voxels in the Thanks for taking the time, |
Hi, The reason that the matrix is not square, but rather has one dimension of length 2x the other, is that projections are categorized as coming from the same or different side as the injection (ipsi or contra). You can map from the VoxelArray to the ccf using the coordinates attribute of the Mask class. This object takes a major_brain_structure as an argument. The major_brain_structures are Hope that helps, |
Hi,
I've only recently started using this awesome research, so I might be missing something obvious here. Is there a way to know the coordinates in a given reference frame for one of the voxels in
VoxelModel
?I would need this for visualisation and to sort voxels based on their spatial location, but couldn't figure out a way to do this.
Thank you!
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