Skip __temp__ ephys folder copying

AllenInstitute · Dec 9, 2023 · 58ba321 · 58ba321
1 parent e02c372
commit 58ba321
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/src/np_workflows/shared/base_experiments.py b/src/np_workflows/shared/base_experiments.py
@@ -740,6 +740,8 @@ def copy_ephys(self) -> None:
         password = np_config.fetch('/logins')['svc_neuropix']['password']
         ssh = fabric.Connection(host=np_services.OpenEphys.host, user='svc_neuropix', connect_kwargs=dict(password=password))
         for ephys_folder in np_services.OpenEphys.data_files:
+            if '__temp__' in ephys_folder.name:
+                continue
             if isinstance(self.session, np_session.TempletonPilotSession):
                 ephys_folder = next(ephys_folder.glob('Record Node*'))
             with ssh, contextlib.suppress(invoke.UnexpectedExit):