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76 Open 249 Closed
76 Open 249 Closed
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Issues list

negative insert coordinates for mapping surfaces to fullfield
#566 opened Apr 3, 2023 by nataliaorlova
Develop LIMS strategies and changes to implement the SSF pipeline Epic
#546 opened Nov 29, 2022 by morriscb
6 tasks
Create stop gap LIMS2 queues for denoising training/inference + classifier inference Epic
#543 opened Nov 22, 2022 by morriscb
Create denoiser ophys_etl_pipelines modules Epic
#542 opened Nov 22, 2022 by morriscb
3 tasks
1
z-stack registration
#534 opened Sep 28, 2022 by jkim0731
Decrosstalk resulting in NaN values for Dendrite Experiments
#526 opened Sep 26, 2022 by Ahad-Allen
3
Decoupling splitting of critical data streams from the rest in Mesoscope splitting
#523 opened Sep 14, 2022 by nataliaorlova
2
Implement utility function to generate "independent events plot" for an ROI from its crosstalk data file
#520 opened Sep 13, 2022 by danielsf
1
Document and store SSF data generation scripts
#518 opened Sep 12, 2022 by danielsf
3 tasks
Package last 5 SSF experiments into NWB
#517 opened Sep 12, 2022 by danielsf
2 tasks
output native suite2p segmentation file
#510 opened Jul 25, 2022 by mattjdavis
Splitting to handle multiple frames per plane
#500 opened May 25, 2022 by nataliaorlova
4
move cell_roi_creation executable over to ophys_etl_pipelines
#496 opened May 19, 2022 by danielsf
3 tasks
local z stacks
#495 opened May 18, 2022 by nataliaorlova
2
Transition ophys_etl_pipelines from CircleCI to GitHub Actions
#485 opened Apr 25, 2022 by danielsf
Automatically generate downsampled TIFFs as an artifact of motion correction
#483 opened Apr 18, 2022 by danielsf
2 tasks
revisit shared dev LIMS for Pika
#475 opened Mar 25, 2022 by danielsf
2 tasks
1
Speed up mesoscope TIFF splitting
#473 opened Mar 23, 2022 by danielsf
3 tasks
1
Design Pika's denoiser module
#472 opened Mar 22, 2022 by danielsf
5 tasks
Write data generator for denoising
#471 opened Mar 22, 2022 by danielsf
3 tasks
Write module to train denoiser
#470 opened Mar 22, 2022 by danielsf
Write module to run denoising inference
#469 opened Mar 22, 2022 by danielsf
1 task
data processing issues for recent MESO2 data in LearningmFISHTask1A project code
#463 opened Feb 24, 2022 by matchings
1
Investigate if we are handling motion borders consistently bug Something isn't working
#458 opened Feb 18, 2022 by danielsf
Fix transient timeout failures
#457 opened Feb 17, 2022 by danielsf
1
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