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@@ -8,7 +8,7 @@ Installation instructions for AmpliconArchitect are provided here, but to prepar
### Recent updates:
### February 2024 update
-`1.3.r8` adds breakpoint microhomology detection from reads marked as supplementary (not just secondary). Also tweaks sashimi plot visualization of CN.
-`1.3.r8` adds breakpoint microhomology detection from alignments marked as supplementary (not just secondary). Also tweaks sashimi plot visualization of CN.
### December 2023 update
-`1.3.r7` refines the CN segmentation shown in the visualizations to prevent mismatches between displayed CN and coverage. Also allows SV VCF to use "." in the FILTER field instead of only "PASS". MOSEK convergence criteria relaxed slightly to prevent rare termination issues.
