Popular repositories

1. buildGeneTree buildGeneTree Public

   Takes gene fasta and directory of fastas and build phylogenetic tree using IQtree

   Python 1

2. entropy entropy Public

   Compare genes across samples and generate phylogenetic tree based on most diverse genes.

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3. geneNeighbourhoodDiagram geneNeighbourhoodDiagram Public

   Generates diagram of genes in vicinity of specified gene. Meant for use with prokka annotated files.

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4. accessoryGenomeBuilder accessoryGenomeBuilder Public

   Build accessory genome of bacterial samples

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5. KpHypervirulence KpHypervirulence Public

   Data for investigation of Klebsiella pneumonia hypervirulence phenotype

6. KpReplicons KpReplicons Public

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