…pose

Now outputs WLs and trans for individual fibre

Cleaned up the code, added more comments for clarity, fixed HR NIR mode

…e it in an Effect object

1) Added a class variable containing pd table of fibre dimensions,
columns of fibre_id,dx,dy
2) Changed run function's transmission array to a dictionary with keys of fibre_id

Implemented code to generate a hexagonal aperture array for an arbitrary number of rings
HR_VIS now is working as a 3-layer hexagon array can be made

Hexagonal aperture arrays were odd-sized with a central pixel
This meant hexagons would leave a gap or overlap due to symmetry
Fixed so that the arrays for the aperture and PSF arrays are now even-sized