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simcoli is a very simple cell simulator. Hopefully it will become more powerful overtime to

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simcoli

cellinator is a very simple cell simulator. Hopefully it will become more powerfull overtime.

The cutest Escherichia coli ever drawn. It also has a Rust logo in the middle

Model roadmap

  • Simple diffusion implementation between equal volume solvents via permeating membranes
  • Fick's law based diffusion
  • electrochemical gradient
  • glucose metabolism
  • lactose metabolism
  • lactose operon regulation
  • Osmosis
  • Osmotic stress regulation (porins)

Technical roadmap

  • Python bindings
  • Containerization
  • Webassembly

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simcoli is a very simple cell simulator. Hopefully it will become more powerful overtime to

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