Count FLOPs and HitRate inside functor and output them to a log file #1571
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| # Workflow for unit tests | |
| name: CI | |
| # This Workflow is triggered by any PR or a direct push to master. | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| # abort old runs if a new one is started | |
| concurrency: | |
| group: ${{ github.head_ref }}-tests | |
| cancel-in-progress: true | |
| jobs: | |
| # Check that everything is formatted correctly. This does not apply any changes! | |
| StyleCheck: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: DoozyX/clang-format-lint-action@v0.16.2 | |
| with: | |
| source: 'src tests examples applicationLibrary tools' | |
| # exclude: 'none' | |
| extensions: 'h,cpp' | |
| clangFormatVersion: 14 | |
| style: file | |
| # Make sure contribution guidelines are followed. This does not apply any changes! | |
| CustomChecks: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Checks | |
| # this exits immediately when any command returns != 0 | |
| run: | | |
| # enable recursive globbing syntax | |
| shopt -s globstar | |
| # '!' at the beginning of the line negates the exit code | |
| # all headers should contain pragma once | |
| ! grep --files-without-match '#pragma once' **/*.h | |
| # all files should contain a file comment | |
| ! grep --files-without-match '@file' **/*.{h,cpp} | |
| # no file should contain 'NULL' | |
| ! grep --word-regexp 'NULL' **/*.{h,cpp} | |
| # no file should contain 'assert' | |
| ! grep --word-regexp 'assert' **/*.{h,cpp} | |
| # no file should include autopas with '<>' | |
| ! grep '#include <autopas' **/*.{h,cpp} | |
| # prohibit 'typedef' to force 'using' | |
| ! grep --word-regexp 'typedef' **/*.{h,cpp} | |
| # prohibit old usage of AUTOPAS_OPENMP | |
| ! grep '#ifdef AUTOPAS_OPENMP' **/*.{h,cpp} | |
| ! grep '#if defined.AUTOPAS_OPENMP' **/*.{h,cpp} | |
| MatrixJob: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| part: [1, 2] # Split tests into two parts, to be run by separate runners | |
| md-flex-mode: [singlesite, multisite] | |
| config: [ | |
| # 0 1 2 3 4 5 6 7 8 | |
| # container , CC , CXX , builder , mode , OpenMP , ASan, TSan, AVX | |
| [autopas-build-clang , clang, clang++, Ninja , Debug , ON , ON , OFF , ON], | |
| [autopas-build-clang , clang, clang++, Ninja , Release, OFF , ON , OFF , ON], | |
| [autopas-build-archer, clang, clang++, Ninja , Release, ON , OFF , ON , ON], | |
| [autopas-build-clang , clang, clang++, Ninja , Release, ON , ON , OFF , ON], | |
| [autopas-build-gcc , gcc , g++ ,"'Unix Makefiles'", Release, ON , OFF , OFF , ON], | |
| [autopas-build-gcc , mpicc, mpic++ ,"'Unix Makefiles'", Release, ON , ON , OFF , ON], | |
| ] | |
| exclude: | |
| # Exclude multisite tests (to later be re-added for some configurations) | |
| - md-flex-mode: multisite | |
| # Exclude MPI configuration from part 2, as there are not many tests and so don't need to be split | |
| - config: [autopas-build-gcc , mpicc, mpic++ ,"'Unix Makefiles'", Release, ON , ON , OFF , ON] | |
| part: 2 | |
| # For two configurations, compile with Multi-Site Molecule support for md-flexible. There are not so many tests | |
| # so we only add tests for part 1 | |
| include: | |
| - config: [autopas-build-archer, clang, clang++, Ninja , Release, ON , OFF , ON , OFF] | |
| md-flex-mode: multisite | |
| part: 1 | |
| - config: [autopas-build-gcc , mpicc, mpic++ ,"'Unix Makefiles'", Release, ON , ON , OFF , OFF] | |
| md-flex-mode: multisite | |
| part: 1 | |
| name: Matrix - ${{ matrix.config[1] }}|${{ matrix.config[4] }}|${{ matrix.md-flex-mode }}|OpenMP=${{ matrix.config[5] }}|ASan=${{ matrix.config[6] }}|TSan=${{ matrix.config[7] }} (${{ matrix.part }}/2) | |
| container: autopas/${{ matrix.config[0] }} | |
| env: | |
| TSAN_OPTIONS: "ignore_noninstrumented_modules=1" | |
| LSAN_OPTIONS: "verbosity=1:log_threads=1" | |
| defaults: | |
| run: | |
| # make sure the scripts are executed with bash (needed for [[) and not sh. | |
| shell: bash | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Build everything | |
| run: | | |
| # derive whether or not to compile with MPI options ON. | |
| [ "${{ matrix.config[1] }}" = 'mpicc' ] && UseMPI=ON || UseMPI=OFF | |
| mkdir build && cd build | |
| CC=${{ matrix.config[1] }} CXX=${{ matrix.config[2] }} cmake \ | |
| -G ${{ matrix.config[3] }} \ | |
| -DCCACHE=ON \ | |
| -DCMAKE_BUILD_TYPE=${{ matrix.config[4] }} \ | |
| -DAUTOPAS_LOG_ALL=ON \ | |
| -DAUTOPAS_MIN_LOG_LVL:STRING=TRACE \ | |
| -DAUTOPAS_OPENMP=${{ matrix.config[5] }} \ | |
| -DAUTOPAS_ENABLE_ADDRESS_SANITIZER=${{ matrix.config[6] }} \ | |
| -DAUTOPAS_ENABLE_THREAD_SANITIZER=${{ matrix.config[7] }} \ | |
| -DAUTOPAS_INTERNODE_TUNING=${UseMPI} \ | |
| -DMD_FLEXIBLE_USE_MPI=${UseMPI} \ | |
| -DMD_FLEXIBLE_MODE=${{ matrix.md-flex-mode }} \ | |
| -DMD_FLEXIBLE_FUNCTOR_AUTOVEC=ON \ | |
| -DMD_FLEXIBLE_FUNCTOR_AUTOVEC_GLOBALS=OFF \ | |
| -DMD_FLEXIBLE_FUNCTOR_AVX=${{ matrix.config[8] }} \ | |
| -DMD_FLEXIBLE_FUNCTOR_SVE=OFF \ | |
| -DAUTOPAS_ENABLE_ALLLBL=${UseMPI} \ | |
| -DAUTOPAS_ENABLE_RULE_BASED_TUNING=ON \ | |
| .. | |
| entrypoint.sh cmake --build . --parallel 8 | |
| - name: Run tests ${{ matrix.part }}/2 | |
| run: | | |
| # If single-site & No MPI, run every other AutoPas and example test | |
| if [[ "${{ matrix.md-flex-mode }}" = 'singlesite' ]] && [[ "${{ matrix.config[1] }}" != 'mpicc' ]] | |
| then | |
| cd build | |
| # Start with test 0 or 1 and do every second test | |
| ctest --output-on-failure -I ${{ matrix.part }},,2 -j 2 | |
| cd applicationLibrary | |
| ctest --output-on-failure -I ${{ matrix.part }},,2 -j 2 | |
| cd ../examples | |
| ctest --output-on-failure --build-config checkExamples -I ${{ matrix.part }},,2 -j 2 | |
| fi | |
| # If single-site & MPI, run MPI tests for AutoPas and example tests | |
| if [[ "${{ matrix.md-flex-mode }}" = 'singlesite' ]] && [[ "${{ matrix.config[1] }}" = 'mpicc' ]] | |
| then | |
| cd build | |
| # Only run MPI tests. | |
| # No `--oversubscribe`, as MPI in container doesn't need it. | |
| ctest --output-on-failure --tests-regex MPIParallelAutoPasTests | |
| cd examples | |
| # exclude examples that do not support MPI | |
| ctest --output-on-failure --build-config checkExamples --exclude-regex 'sph-((main.test)|(diagram.*))' | |
| fi | |
| # If multi-site run every md-flexible test and multi site tests | |
| if [[ "${{ matrix.md-flex-mode }}" = 'multisite' ]] | |
| then | |
| cd build/applicationLibrary | |
| # Only run multi-site tests for non-mpi case | |
| if [[ "${{ matrix.config[1] }}" != 'mpicc' ]] | |
| then | |
| ctest --output-on-failure --tests-regex '[mM]ulti[sS]ite' | |
| fi | |
| cd ../examples/md-flexible | |
| ctest --output-on-failure --build-config mdFlexTests | |
| fi | |