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Docs nav fix after 400 #591

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merged 8 commits into from
Dec 4, 2023
Merged

Docs nav fix after 400 #591

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c33bc4a
docs: add core documentation to user guide
younesStrittmatter Dec 2, 2023
cbf1387
docs: fix issue resulting from navigation.index extension
younesStrittmatter Dec 2, 2023
0fcbfbf
docs: add terminology page
younesStrittmatter Dec 2, 2023
3c06e0e
docs: fix broken path
younesStrittmatter Dec 2, 2023
31f77d1
Merge branch 'main' into docs-nav-fix-after-400
hollandjg Dec 4, 2023
430a889
docs: simplify core import
younesStrittmatter Dec 4, 2023
5e4bd19
docs: note Python 3.10 requirement
benwandrew Dec 4, 2023
5a9af21
docs: fix spacing and edit language
benwandrew Dec 4, 2023
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4 changes: 3 additions & 1 deletion docs/theorist/Equation Discovery.ipynb
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Expand Up @@ -6,7 +6,9 @@
"source": [
"# Automated Equation Discovery With The Bayesian Machine Scientist \n",
"\n",
"In this tutorial we will demonstrate how to autonomously recover equations from data using the Bayesian Machine Scientist. We will follow the sci-kit learn workflow."
"In this tutorial we will demonstrate how to autonomously recover equations from data using the Bayesian Machine Scientist. We will follow the sci-kit learn workflow.\n",
"\n",
"Note: this tutorial requires Python 3.10 to run successfully."
]
},
{
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20 changes: 12 additions & 8 deletions mkdocs.yml
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Expand Up @@ -36,17 +36,13 @@ plugins:
- name: core
import_url: "https://github.com/autoresearch/autora-core/?branch=main"
imports: [
"docs/cycle/*",
"docs/pipeline/*",
"docs/experimentalists/grid/*",
"docs/experimentalists/random/*",
"docs/cli/*/*",
"docs/",
"src/",
]
- name: user-cookiecutter
import_url: "https://github.com/autoresearch/autora-user-cookiecutter/?branch=main"
imports: [
"docs/*",
"docs/",
]
- name: darts
import_url: "https://github.com/autoresearch/autora-theorist-darts/?branch=main"
Expand Down Expand Up @@ -158,11 +154,19 @@ nav:
- III - Functional Workflow: 'tutorials/basic/Tutorial-III-Functional-Workflow.ipynb'
- IV - Customization: 'tutorials/basic/Tutorial-IV-Customization.ipynb'
- Advanced:
- Equation Discovery: 'tutorials/Equation Discovery.ipynb'
- Equation Discovery: 'theorist/Equation Discovery.ipynb'
- Experimentalists: 'tutorials/Experimentalist.ipynb'
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@benwandrew benwandrew Dec 3, 2023 •
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this isn't really an advanced Experimentalist tutorial, is it?

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Yes, it was in the advanced tutorials before, but was a broken link. I just changed the path.

BTW: There is another tutorial file in the advanced folder called "Theorist.ipynb" that we don't use anywhere right now. I was not sure about that one either.

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We should also mark the theorist/Equation Discovery.ipynb file as requiring python3.10, because it uses the case-match statement which is first available then. (Or we should use the old if-elif-else syntax instead.) That would be a different PR though.

- Online Closed-Loop Discovery: 'user-cookiecutter/docs/index.md'
- Online Closed-Loop Discovery:
- 'user-cookiecutter/docs/index.md'
- User Guide:
- Installation: 'installation.md'
- Terminology: 'terminology.md'
- Core:
- Home: 'core/docs/index.md'
- Examples:
- 'core/docs/cycle/Basic Introduction to Functions and States.ipynb'
- 'core/docs/cycle/Combining Experimentalists with State.ipynb'
- 'core/docs/cycle/Linear and Cyclical Workflows using Functions and States.ipynb'
- Theorists:
- Home: 'theorist/index.md'
- DARTS: '!import https://github.com/autoresearch/autora-theorist-darts/?branch=main&extra_imports=["mkdocs/base.yml"]'
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