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1. compartment-segmentation compartment-segmentation Public

   Forked from fabio-echegaray/compartment-segmentation

   Python project to segment nuclear compartments from indirect microscopy data.

   Python

2. interactome-go interactome-go Public

   Forked from fabio-echegaray/interactome-go

   This is a Python project that builds an interactome network in Cytoscape from gene ontology annotations.

   Python

3. Cdk1-FRET-Calculation Cdk1-FRET-Calculation Public

   Jupyter notebook outlining the

   Jupyter Notebook

4. movie-render movie-render Public

   Forked from fabio-echegaray/movie-render

   A Python package for rendering images and overlay data to video.

   Python

5. stack-to-openvdb stack-to-openvdb Public

   A script to export Z-stacks from confocal microscopy into a file compliant with the OpenVDB file format.

   Python

6. fileops fileops Public

   Forked from fabio-echegaray/fileops

   File utilities that we use at the Aydogan Lab

   Python