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@BGAcademy23

Biodiversity Genomics Academy 2023

Free, open to all, online-only, short, interactive sessions on how to use the bioinformatics tools and resources that underpin the Earth Biogenome Project

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  1. smudgeplot smudgeplot Public

    Biodiversity Genomics Academy 2023: Understanding k-mers and ploidy using Smudgeplot

    8 3

  2. B3 B3 Public

    Biodiversity Genomics Academy 2023: Gene prediction with BRAKER3

    AMPL 7 3

  3. ensembl-annotation ensembl-annotation Public

    Biodiversity Genomics Academy 2023: Annotating genomes the Ensembl way - General concepts + Case study

    6 1

  4. manual-curation manual-curation Public

    Biodiversity Genomics Academy 2023: Introduction to Manual Curation - HiC and JBrowse

    3 3

  5. genomescope genomescope Public

    Biodiversity Genomics Academy 2023: Genome profiling using GenomeScope

    2 1

  6. merqury merqury Public

    Biodiversity Genomics Academy 2023: Assess genome assemblies with Merqury

    2

Repositories

Showing 10 of 30 repositories
  • ensembl-annotation Public

    Biodiversity Genomics Academy 2023: Annotating genomes the Ensembl way - General concepts + Case study

    BGAcademy23/ensembl-annotation’s past year of commit activity
    6 MIT 1 0 0 Updated Mar 18, 2024
  • BGAcademy23.github.io Public
    BGAcademy23/BGAcademy23.github.io’s past year of commit activity
    0 MIT 0 0 0 Updated Sep 30, 2023
  • cactus Public

    Biodiversity Genomics Academy 2023: Aligning whole genomes using Cactus

    BGAcademy23/cactus’s past year of commit activity
    0 MIT 1 0 0 Updated Sep 29, 2023
  • merqury Public

    Biodiversity Genomics Academy 2023: Assess genome assemblies with Merqury

    BGAcademy23/merqury’s past year of commit activity
    2 MIT 0 0 0 Updated Sep 26, 2023
  • busco Public

    Biodiversity Genomics Academy 2023: BUSCO - from QC to gene prediction and phylogenomics

    BGAcademy23/busco’s past year of commit activity
    1 MIT 1 0 0 Updated Sep 26, 2023
  • goat Public

    Biodiversity Genomics Academy 2023: Querying genome metadata and sequencing projects using GoaT

    BGAcademy23/goat’s past year of commit activity
    0 MIT 1 0 0 Updated Sep 25, 2023
  • pangenome Public

    Biodiversity Genomics Academy 2023: Pangenome Assembly and Assessment using Minigraph and Bandage

    BGAcademy23/pangenome’s past year of commit activity
    0 MIT 0 0 0 Updated Sep 22, 2023
  • gfastar Public

    Biodiversity Genomics Academy 2023: Gfastar: a tool suite to assist genome assembly

    BGAcademy23/gfastar’s past year of commit activity
    1 MIT 2 0 0 Updated Sep 22, 2023
  • hifiasm-telomere Public

    Biodiversity Genomics Academy 2023: Scalable telomere-to-telomere assembly with hifiasm

    BGAcademy23/hifiasm-telomere’s past year of commit activity
    1 MIT 0 0 0 Updated Sep 22, 2023
  • B3 Public

    Biodiversity Genomics Academy 2023: Gene prediction with BRAKER3

    BGAcademy23/B3’s past year of commit activity
    AMPL 7 MIT 3 0 0 Updated Sep 22, 2023
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