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hewm2008@bgi

hewm2008‘s software

Pinned

  1. PopLDdecay PopLDdecay Public

    PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

    C++ 172 53

  2. LDBlockShow LDBlockShow Public

    LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

    Perl 124 39

  3. RectChr RectChr Public

    Multi-level visualization of genomic statistical variables on rectangular chromosomes

    Perl 71 10

  4. Reseqtools Reseqtools Public

    A Toolkit for analyzing next-generation DNA Re-Sequencing data

    80 28

  5. VCF2Dis VCF2Dis Public

    VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

    C++ 72 20

  6. BamDeal BamDeal Public

    BamDeal: a comprehensive toolkit for bam manipulation

    C++ 51 20

Repositories

Showing 10 of 14 repositories
  • RectChr Public

    Multi-level visualization of genomic statistical variables on rectangular chromosomes

    Perl 71 10 0 0 Updated Jan 21, 2024
  • LDBlockShow Public

    LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

    Perl 124 MIT 39 10 1 Updated Oct 5, 2023
  • VCF2Dis Public

    VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

    C++ 72 MIT 20 4 0 Updated Jun 20, 2023
  • BamDeal Public

    BamDeal: a comprehensive toolkit for bam manipulation

    C++ 51 MIT 20 2 1 Updated Dec 21, 2022
  • PopLDdecay Public

    PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

    C++ 172 MIT 53 6 0 Updated Jun 27, 2022
  • fqcheck Public Forked from hewm2008/fqcheck

    fqcheck: A new simple and efficient software to stat base and quality distribution of fq file

    C++ 0 3 0 0 Updated Feb 17, 2022
  • FxTools Public

    FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation

    C++ 29 MIT 11 2 0 Updated Feb 16, 2022
  • Reseqtools Public

    A Toolkit for analyzing next-generation DNA Re-Sequencing data

    80 GPL-2.0 28 3 0 Updated Feb 15, 2022
  • gcaPDA Public

    gamete cell assisted chromosome-scale phased diploid assembler

    Perl 5 1 0 0 Updated Mar 26, 2021
  • RRSelection Public

    RRSelection: A linkage disequilibrium method to detect selection region across population VCF

    C++ 10 MIT 2 0 0 Updated Feb 11, 2019

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