Skip to content

Commit

Permalink
Set all service_id to null
Browse files Browse the repository at this point in the history
  • Loading branch information
@svarona
svarona committed Oct 19, 2023
1 parent 244a6b5 commit 3d903fe
Showing 1 changed file with 23 additions and 23 deletions.
46 changes: 23 additions & 23 deletions conf/first_install_tables.json
View file
Original file line number Diff line number Diff line change
Expand Up @@ -1028,7 +1028,7 @@
"avail_service_description": "Sequencing quality analysis and host genome removal",
"parent": 4,
"service_in_use": true,
"service_id": "seek_and_destroy",
"service_id": null,
"description": null,
"lft": 7,
"rght": 8,
Expand All @@ -1043,7 +1043,7 @@
"avail_service_description": "Human: Exome sequencing for variant calling, annotation and inheritance filtering (e.g. Exome sequencing of a human trio (two parents and one child))",
"parent": 12,
"service_in_use": true,
"service_id": "exometrio",
"service_id": null,
"description": null,
"lft": 16,
"rght": 17,
Expand All @@ -1058,7 +1058,7 @@
"avail_service_description": "Eukaria: Variant calling and annotation for a sequencing panel (e.g. epidermolysis gene panel, mouse or rat gene panel)",
"parent": 12,
"service_in_use": true,
"service_id": "exomeeb",
"service_id": null,
"description": null,
"lft": 14,
"rght": 15,
Expand All @@ -1073,7 +1073,7 @@
"avail_service_description": "Fungal / bacteria / virus : Variant calling, annotation and SNP-based outbreak analysis (e.g. haploid fungal outbreak)",
"parent": 12,
"service_in_use": true,
"service_id": "snippy",
"service_id": null,
"description": null,
"lft": 22,
"rght": 23,
Expand All @@ -1088,7 +1088,7 @@
"avail_service_description": "Bacteria: Core genome or whole genome Multi-Locus Sequence Typing analysis (cg/wgMLST)",
"parent": 12,
"service_in_use": true,
"service_id": "wgmlst_chewbbaca",
"service_id": null,
"description": null,
"lft": 32,
"rght": 33,
Expand All @@ -1103,7 +1103,7 @@
"avail_service_description": "Bacteria: Multi-Locus Sequence Typing (MLST), analysis of virulence factors, antimicrobial resistance, and plasmids characterization",
"parent": 12,
"service_in_use": true,
"service_id": "characterization",
"service_id": null,
"description": null,
"lft": 30,
"rght": 31,
Expand All @@ -1118,7 +1118,7 @@
"avail_service_description": "Bacteria: De novo genome assembly and annotation",
"parent": 12,
"service_in_use": true,
"service_id": "assembly_annotation",
"service_id": null,
"description": null,
"lft": 24,
"rght": 25,
Expand All @@ -1133,7 +1133,7 @@
"avail_service_description": "Bacteria: Plasmid analysis and characterization",
"parent": 12,
"service_in_use": true,
"service_id": "plasmidid_assembly",
"service_id": null,
"description": null,
"lft": 28,
"rght": 29,
Expand All @@ -1148,7 +1148,7 @@
"avail_service_description": "Differential miRNA expression (DEM)",
"parent": 13,
"service_in_use": true,
"service_id": "mirnaseq",
"service_id": null,
"description": null,
"lft": 44,
"rght": 45,
Expand All @@ -1163,7 +1163,7 @@
"avail_service_description": "Differential Gene Expression (DEG)",
"parent": 13,
"service_in_use": true,
"service_id": "rnaseq",
"service_id": null,
"description": null,
"lft": 40,
"rght": 41,
Expand All @@ -1178,7 +1178,7 @@
"avail_service_description": "Low-frequency variants detection and annotation for whole genome or sequencing panel (e.g. retinoblastoma gene panel)",
"parent": 12,
"service_in_use": true,
"service_id": "lowfreq_panel",
"service_id": null,
"description": null,
"lft": 12,
"rght": 13,
Expand All @@ -1193,7 +1193,7 @@
"avail_service_description": "Viral: Genomic reconstruction, variant calling and de novo assembly",
"parent": 12,
"service_in_use": true,
"service_id": "viralrecon",
"service_id": null,
"description": null,
"lft": 34,
"rght": 35,
Expand All @@ -1208,7 +1208,7 @@
"avail_service_description": "Bacteria: 16S rRNA gene analysis to assess bacterial diversity",
"parent": 15,
"service_in_use": true,
"service_id": "16s_metagenomics",
"service_id": null,
"description": null,
"lft": 56,
"rght": 57,
Expand All @@ -1223,7 +1223,7 @@
"avail_service_description": "Taxonomic based Identification and classification of organisms in complex communities",
"parent": 15,
"service_in_use": true,
"service_id": "mag_met",
"service_id": null,
"description": null,
"lft": 52,
"rght": 53,
Expand Down Expand Up @@ -1268,7 +1268,7 @@
"avail_service_description": "Shotgun metagenomics - Virus genome reconstruction",
"parent": 15,
"service_in_use": false,
"service_id": "viralrecon",
"service_id": null,
"description": null,
"lft": 60,
"rght": 61,
Expand Down Expand Up @@ -1298,7 +1298,7 @@
"avail_service_description": "Bacteria: In-depth analysis of Mycobacterium species genomes (e.g. M. tuberculosis. M. bovis)",
"parent": 12,
"service_in_use": true,
"service_id": "mtbseq",
"service_id": null,
"description": null,
"lft": 26,
"rght": 27,
Expand All @@ -1313,7 +1313,7 @@
"avail_service_description": "Human: Whole genome sequencing for SNPs variant calling, annotation and inheritance filtering (e.g.WGS of a human trio )",
"parent": 12,
"service_in_use": true,
"service_id": "wgstrio",
"service_id": null,
"description": null,
"lft": 18,
"rght": 19,
Expand All @@ -1328,7 +1328,7 @@
"avail_service_description": "Eukaria (non-human): Variant calling, annotation and SNP-based outbreak analysis (e.g. diploid fungal outbreak)",
"parent": 12,
"service_in_use": true,
"service_id": "freebayes_outbreak",
"service_id": null,
"description": null,
"lft": 20,
"rght": 21,
Expand All @@ -1343,7 +1343,7 @@
"avail_service_description": "Viral Flu: Influenza fragment reconstruction and variant detection",
"parent": 12,
"service_in_use": true,
"service_id": "irma_flu",
"service_id": null,
"description": null,
"lft": 36,
"rght": 37,
Expand All @@ -1358,7 +1358,7 @@
"avail_service_description": "Differential transcript expression (DET)",
"parent": 13,
"service_in_use": true,
"service_id": "rnaseq",
"service_id": null,
"description": null,
"lft": 42,
"rght": 43,
Expand All @@ -1373,7 +1373,7 @@
"avail_service_description": "Gene expression changes over a series of time points",
"parent": 13,
"service_in_use": true,
"service_id": "timeseries_rnaseq",
"service_id": null,
"description": null,
"lft": 46,
"rght": 47,
Expand All @@ -1388,7 +1388,7 @@
"avail_service_description": "De novo assembly contigs' alignment to database",
"parent": 15,
"service_in_use": true,
"service_id": "blast_nt",
"service_id": null,
"description": null,
"lft": 54,
"rght": 55,
Expand All @@ -1403,7 +1403,7 @@
"avail_service_description": "Viral: Detection and characterization of viral genomes within metagenomic data",
"parent": 15,
"service_in_use": true,
"service_id": "pikavirus",
"service_id": null,
"description": null,
"lft": 58,
"rght": 59,
Expand Down

0 comments on commit 3d903fe

Please sign in to comment.