If the run created in iSkyLIMS_wetlab already exists, the projects are duplicated when the run is loaded.

[pnatividad-incliva]

In the file handling_crontab_bcl2fastq.py defines the function process_and_store_raw_demux_project_data , which reads the samplesheet projects and, if they do not exist, registers them. In some cases the project already exists, and this procedure duplicates them. To solve it the code has been modified:

for project in parsed_data.keys():
if project == 'TopUnknownBarcodes' or project == 'all' or project == 'default':
continue
if not project in project_list:
# create project and link to the run
# check if project exists yet
if not Projects.objects.filter(projectName__exact = project).exists():
new_project_obj = Projects.objects.create_new_empty_project({'user_id':None, 'projectName':project})
else:
new_project_obj = Projects.objects.filter(projectName__exact = project).last()
new_project_obj.runProcess.add(run_process_obj)
string_message = experiment_name + ' : Created project name ' + project + 'Because it was not store'
logging_warnings(string_message, True)

[luissian]

Issue solved in commit f853945