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Demo docker system and bug fixing #194

Merged
merged 28 commits into from
Jul 27, 2023
Merged

Demo docker system and bug fixing #194

merged 28 commits into from
Jul 27, 2023

Commits on Jul 27, 2023

  1. fixed path shared folder in docker compose conf

    @saramonzon
    saramonzon committed Jul 27, 2023
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  2. added try catch in samba check testing conf

    @saramonzon
    saramonzon committed Jul 27, 2023
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  3. fixed apache group issues and log path error in install.sh

    @saramonzon
    saramonzon committed Jul 27, 2023
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  4. improved error message when proper user id is not found in sampleshee… 

    …t description
    @saramonzon
    saramonzon committed Jul 27, 2023
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  5. rm docker param from install script

    @saramonzon
    saramonzon committed Jul 27, 2023
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  6. added option to provide downloaded demo data to docker install script

    @saramonzon
    saramonzon committed Jul 27, 2023
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  7. added new param docker install with path to demo data

    @saramonzon
    saramonzon committed Jul 27, 2023
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  8. Revert "rm docker param from install script" 

    This reverts commit 867c712.
    @saramonzon
    saramonzon committed Jul 27, 2023
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  9. fixed bug in sed install.sh

    @saramonzon
    saramonzon committed Jul 27, 2023
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  10. fix logging info in crontab update run

    @saramonzon
    saramonzon committed Jul 27, 2023
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  11. fixed and added correct configuration run test

    @saramonzon
    saramonzon committed Jul 27, 2023
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  12. removed crontab add from install.sh

    @saramonzon
    saramonzon committed Jul 27, 2023
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  13. fixed output_label to false if param not provided

    @saramonzon
    saramonzon committed Jul 27, 2023
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  14. removed unused import

    @saramonzon
    saramonzon committed Jul 27, 2023
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  15. deleted unused file in conf, created test folder with samplesheet tes… 

    …t and crontab log
    @saramonzon
    saramonzon committed Jul 27, 2023
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  16. fixed service api when no context is passed to serializer

    @saramonzon
    saramonzon committed Jul 27, 2023
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  17. fixed first install tables configuration for service and resolution s… 

    …tates
    @saramonzon
    saramonzon committed Jul 27, 2023
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  18. added json with test data for docker system

    @saramonzon
    saramonzon committed Jul 27, 2023
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  19. changed name and removed blank lines in test samplesheet

    @saramonzon
    saramonzon committed Jul 27, 2023
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  20. error in resolution states first install tables

    @saramonzon
    saramonzon committed Jul 27, 2023
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  21. changed names in documents folder to snake case, added tests to rsync… 

    … in install.sh
    @saramonzon
    saramonzon committed Jul 27, 2023
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  22. changed order in docker install sh for dummy data import

    @saramonzon
    saramonzon committed Jul 27, 2023
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  23. added again first install tables in docker install sh

    @saramonzon
    saramonzon committed Jul 27, 2023
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  24. fixing minor bugs docker install

    @saramonzon
    saramonzon committed Jul 27, 2023
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  25. added species in test_data.json

    @saramonzon
    saramonzon committed Jul 27, 2023
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  26. removed organization name from wetlab index

    @saramonzon
    saramonzon committed Jul 27, 2023
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  27. docker system working with test data

    @saramonzon
    saramonzon committed Jul 27, 2023
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  28. added collection kit values to admin

    @saramonzon
    saramonzon committed Jul 27, 2023
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