Notes supporting the publication:
"Sodium levels and grazing pressure shape natural communities of the intracellular pathogen Legionella."
Raw metagenomic sequences reads generated in this study have been deposited in in the European Nucleotide Archive Database (https://www.ebi.ac.uk/ena/browser/home) as project accession number PRJEB53014.
Figure 1. Map of study sites.
Figure 2. Absolute abundance of Legionella sp. follows sodium concentrations.
Figure 3. Legionella spp. community structure and composition shows an inverse relation to sodium concentration.
Figure 4. Legionella ASVs group according to sodium concentrations.
Figure 5. Phylogenetic analysis of Legionella ASVs.
Figure 6. Community structure and composition of potential Legionella hosts resembles that of Legionella spp.
Figure 7. Alpha and beta diversity of potential Legionella hosts.
Figures were generated in r (excludign Fig. 3e and Fig. 7c-d, which were generated by the QIIME2 softwere, using the q2-emperor plugin),
grouped and scaled to size in inkscape. For all figures, the r script is presented including all related files, needed to replicate the figures.