Compare labels #22
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Compare labels #22
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added labelwise jaccard-measurement and a label comparison function which should calculate more labels in future versions.
This reverts commit e9bfab7.
haesleinhuepf
approved these changes
Nov 12, 2021
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Hi Johannes @jo-mueller ,
just some minor comments.
Otherwise it looks great and you're welcome to go ahead and merge.
Co-authored-by: Robert Haase <haesleinhuepf@users.noreply.github.com>
Co-authored-by: Robert Haase <haesleinhuepf@users.noreply.github.com>
Co-authored-by: Robert Haase <haesleinhuepf@users.noreply.github.com>
Co-authored-by: Robert Haase <haesleinhuepf@users.noreply.github.com>
Co-authored-by: Robert Haase <haesleinhuepf@users.noreply.github.com>
…lities into compare-labels
Co-authored-by: Robert Haase <haesleinhuepf@users.noreply.github.com>
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Description
I added a method to compare labels between two label images label_image_x and label_image_y. The difference between the images is quantified in terms of Jaccard score and Dice score. The jaccard_score uses the function implemented in scikit-learn, the dice score is derived from the Jaccard-score as described in Wikipedia.
I added a notebook that visualizes the label-wise differences based on example data that is already shipped with biapol_utilities. Tests are included.
Type of change
References
Related to #17
Tests
Final checks