Merge pull request #236 from linsalrob/master

Always add a number to the contigs in cut_up_fasta.py
BinPro · Dec 18, 2018 · c7d69a6 · c7d69a6
2 parents 2638e0f + 8605514
commit c7d69a6
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/scripts/cut_up_fasta.py b/scripts/cut_up_fasta.py
@@ -23,9 +23,9 @@ def cut_up_fasta(fastfiles, chunk_size, overlap, merge_last, bedoutfile):
                               file=bedoutfile_fh)
                     i = i + 1
             else:
-                print(">%s\n%s" % (record.id, record.seq))
+                print(">%s.0\n%s" % (record.id, record.seq))
                 if bedoutfile:
-                    print("{0}\t0\t{1}\t{0}".format(record.id, len(record.seq)),
+                    print("{0}\t0\t{1}\t{0}.0".format(record.id, len(record.seq)),
                           file=bedoutfile_fh)
 
     if bedoutfile: