/
Dockerfile
29 lines (24 loc) · 1.29 KB
/
Dockerfile
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
################## BASE IMAGE ######################
FROM biocontainers/biocontainers:v1.0.0_cv4
################## METADATA ######################
LABEL base_image="biocontainers:v1.0.0_cv4"
LABEL version="3"
LABEL software="PeptideShaker"
LABEL software.version="1.10.3"
LABEL about.summary="interpretation of proteomics identification results"
LABEL about.home="http://compomics.github.io/projects/peptide-shaker.html"
LABEL about.documentation="http://compomics.github.io/projects/peptide-shaker.html"
LABEL about.license_file="https://github.com/compomics/peptide-shaker/blob/master/README.txt"
LABEL about.license="SPDX:Apache-2.0"
LABEL about.tags="Proteomics"
LABEL extra.identifiers.biotools="peptideshaker"
################## MAINTAINER ######################
MAINTAINER Felipe da Veiga Leprevost <felipe@leprevost.com.br>
RUN ZIP=PeptideShaker-1.10.3.zip && \
wget https://github.com/BioDocker/software-archive/releases/download/PeptideShaker/$ZIP -O /tmp/$ZIP && \
unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
rm /tmp/$ZIP && \
bash -c 'echo -e "#!/bin/bash\njava -jar /home/biodocker/bin/PeptideShaker-1.10.3/PeptideShaker-1.10.3.jar \$@"' > /home/biodocker/bin/PeptideShaker && \
chmod +x /home/biodocker/bin/PeptideShaker
ENV PATH /home/biodocker/bin/PeptideShaker:$PATH
WORKDIR /data/