@BioContainers

BioContainers

A community-driven project to create and manage bioinformatics software containers

Pinned repositories

  1. containers

    Bioinformatics containers

    Dockerfile 231 97

  2. specs

    BioContainers specifications

    35 12

  3. mulled

    Mulled - Automatized Containerized Software Repository

    34 20

  4. multi-package-containers

    Testing building mulled containers for multi-requirement tools.

    4 17

  • containers

    Bioinformatics containers

    dockerfiles bioinformatics docker-image rkt bioinformatics-containers biocontainers-architecture bioinformatics-analysis
    Dockerfile 231 97 Apache-2.0 Updated Sep 20, 2018

  • service-containers

    Repository containing Services that can be deploy using Containers technologies (Docker Compose, Heml)

    Updated Sep 20, 2018

  • multi-package-containers

    Testing building mulled containers for multi-requirement tools.

    docker containers
    4 17 Updated Sep 15, 2018

  • registry-backend

    Java 1 Apache-2.0 Updated Sep 14, 2018

  • backup-scripts

    scritps for different backups in biocontainers

    Python Apache-2.0 Updated Sep 14, 2018

  • ci

    Continuous integrations scripts for biocontainers

    Python 1 Updated Aug 26, 2018

  • specs

    BioContainers specifications

    docker bioinformatics specifications rkt biocontainers-specification biocontainers bioinformatics-containers
    35 12 Apache-2.0 1 issue needs help Updated Aug 27, 2018

  • tool-registry-service-schemas

    Forked from ga4gh/tool-registry-service-schemas

    APIs for discovering genomics tools, their metadata and their containers

    8 Apache-2.0 Updated Jul 27, 2018

  • workflows

    Bioinformatics curated workflows that use Biocontainers tools

    Updated Jun 19, 2018

  • BioContainers.github.io

    Docker for Bioinformatics

    javascript css angularjs jekyll biodocker biocontainers-web
    HTML 15 8 Updated Apr 5, 2018

  • biotools-bioconda-ids

    Mapping scripts between bioconda and biotools IDs

    Jupyter Notebook 4 Updated Mar 23, 2018

  • bioconda-recipes

    Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    Shell 792 Updated Feb 20, 2018

  • containers-ci-system

    Shell Updated Feb 2, 2018

  • edu

    jekyll documentation series travis documentation-code
    CSS 3 14 Updated Nov 15, 2017

  • kubernetes-init

    Shell Updated Nov 10, 2017

  • workshops

    Repository for BioContainers Hackthons and Workshops

    bioinformatics workshop materials containers hackthon
    JavaScript 1 3 Apache-2.0 Updated Oct 11, 2017

  • auto-mulled

    Generating Docker containers from bioconda on the fly with Travis cron-job feature.

    2 4 MIT Updated Jun 23, 2017

  • software-archive

    Binary and source code archive

    internal bioinformatics binaries binary-data
    Updated Feb 7, 2017

  • mulled

    Mulled - Automatized Containerized Software Repository

    docker bioinformatics rkt mulled involucro
    34 20 Updated Nov 18, 2016

  • docker-registry-dev

    BioContainers Registry UI, hosted in http://Biocontainers.pro/registry

    1 Apache-2.0 1 issue needs help Updated Oct 27, 2016

  • local-containers

    This repository contains all the containers that can't be deploy in public registries or need customs settings

    docker-image biocontainers private-cotainers
    Shell Updated Oct 13, 2016

  • boaintheship

    Python 1 Updated Jun 20, 2016

  • tools

    Tools used for the management of the repositories

    Shell Apache-2.0 Updated Oct 5, 2015
    • 17

    People
    @baimingze @bgruening @hbarsnes @hroest @jke000 @julianu @lgatto @mbdebian @Microbiology @ola-t @pcm32 @prvst @r78v10a07 @sauloal @thriqon @timosachsenberg