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This repository has been archived by the owner on Jul 19, 2021. It is now read-only.

Issues: BioInfoTools/BBMap

28 Open 9 Closed
28 Open 9 Closed
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Issues list

[suggestion] rename.sh - offset option for numbering
#40 opened Jul 7, 2021 by JWDebler
How to download the latest version
#39 opened Jun 18, 2021 by asmithw
[reformat.sh] sam output instead of bam with sambamba
#38 opened Jun 16, 2021 by Juke34
bbduk memory error
#37 opened May 10, 2021 by GastonViarengo
Tile comparison in clumpify
#36 opened Mar 13, 2021 by isinaltinkaya
Error while running kmercountmulti.sh
#33 opened Jan 23, 2021 by Oieswarya
How to avoid interleaved output with ecco=t?
#31 opened Mar 8, 2020 by laurapspector
Dedupe and nanopore amplicon reads
#29 opened Feb 19, 2020 by anitagh
Error: Could not find or load main class jgi.BBMerge
#28 opened Feb 3, 2020 by sjfleck
This is NOT the official BBTools source, please don't use it
#26 opened May 24, 2019 by bbushnell
1
How to allow insert base in bbduk.sh?
#25 opened May 4, 2019 by giby
1
rRNA filtering for low RAM.
#24 opened Apr 23, 2019 by raw937
1
filterbyname.sh
#23 opened Apr 9, 2019 by RazaRaza
how do i install and use bbmap on linux cluster?
#22 opened Mar 11, 2019 by mosesBD
filterbyname driver not present
#21 opened Feb 28, 2019 by AlexWixom
Can this software create an abundance table?
#20 opened Jan 27, 2019 by slvrshot
bbmap repair reads renaming error
#19 opened Dec 14, 2018 by laure182
bbduk.sh AssertionError
#18 opened Dec 13, 2018 by yyan823
enhancement for dedupe: absorboverlap
#17 opened Nov 14, 2018 by SilasK
bbmapskimmer.sh returns inconsistant results
#16 opened Sep 5, 2018 by dgg32
clumpify hanging
#15 opened Aug 6, 2018 by nick-youngblut
3
filterbytile.sh only using Xmx1876m on a large 7.4G instance
#13 opened Jul 10, 2018 by avilella
error while running translate6frames.sh
#11 opened May 28, 2018 by TheWrightonLab
2
error when running calctruequality
#9 opened May 8, 2018 by coyk
threads crashing
#6 opened Dec 6, 2017 by ghost
ProTip! Adding no:label will show everything without a label.