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v0.2.1 #26

Merged
merged 1 commit into from
May 11, 2017
Merged

v0.2.1 #26

merged 1 commit into from
May 11, 2017

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rasbt
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@rasbt rasbt commented May 11, 2017

Version 0.2.1dev

Changes
  • The amino3to1 method of biopandas.pdb.PandasPDB objects now returns a pandas DataFrame instead of a pandas Series object. The returned data frame has two columns, 'chain_id' and 'residue_name', where the former contains the chain ID of the amino acid and the latter contains the 1-letter amino acid code, respectively.
  • Significant speed improvements of the distance method of both PandasPdb and PandasMol2 (now about 300 percent faster than previously).
Bug Fixes
  • The amino3to1 method of biopandas.pdb.PandasPDB objects now handles multi-chain proteins correctly.
  • The amino3to1 method of biopandas.pdb.PandasPDB objects now also works as expected if the 'ATOM' entry DataFrame contains disordered DataFrame indices or duplicate DataFrame index values.

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Coverage Status

Coverage remained the same at 94.157% when pulling 10fa12e on 2.1 into 802f1a6 on master.

@rasbt rasbt merged commit 7a7279d into master May 11, 2017
@rasbt rasbt deleted the 2.1 branch September 27, 2017 03:43
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2 participants