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Popular repositories

  1. molUP

    molUP is a VMD extension that provides a simple manner for loading and saving Gaussian files, and analyze related results.

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  2. volArea

    VolArea is a plug-in of the widely spread molecular graphics software Visual Molecular Dynamics (VMD), which allows the calculation of the volume as well as the surface area of any chemical structure.

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  3. compASM

    Protein-protein interactions play a crucial role in molecular recognition and cellular function. Mapping them, provides important insight on how these structures interact and on how to improve or i…

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  4. selectionManager

    VMD is an exceptional program to visualize molecular structures. The main drawback of this software is the learning curve that turns it hard to use by non-expert users.

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  5. vmdMagazine

    Visualization can be a motivating way of teaching students about the microscopic world.


  6. chemPathTracker

    Chem-Path-Tracker is a bioinformatic tool that allows to locate functionally relevant chemical motifs in protein structures.


9 contributions in the last year

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Contribution activity

October - November 2018

BioSIM-Research-Group has no activity yet for this period.

September 2018

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