Bioconductor docker image builder

Requirements

• python 3.5
• PyQt5
• docker-py >= 2.0.0
• Docker engine >= 1.18.0

Install requirements

• PyQt5

  brew install pyqt5

• docker-py

  pip3 install docker

How to run

• Run through docker

docker run --rm -it -v ${PWD}:/root/files -p 6080:6080 biodepot/bioc-builder

OR if you want to use [Build] feature:

docker run --rm -it -v ${PWD}:/root/files -v /var/run/docker.sock:/var/run/docker.sock -p 6080:6080 biodepot/bioc-builder

Then point a browser to localhost:6080 for systems that run Docker natively

For windows and MacOS systems using VNs - find the the ip by docker-machine ip or ping docker.local and point the browser to :6080

• Command line

  python3 BiocImageBuilderMain.py

• macOs precompiled package

  Download docker-image-builder-app-macOS.zip from Release tab

  If you encountered 'Docker Credential' error during the building, please follow: docker-credential-helpers

Embed your own Dockerfiles

Put your Dockerfiles into [DockerFiles] directory and rename your Dockerfile to <title>.Dockerfile

Demo

Screenshots

On macOS

On Ubuntu

On windows