-
Notifications
You must be signed in to change notification settings - Fork 27
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
False positive warning during BiocCheck - Bioconductor software dependencies #207
Comments
Hi @boyiguo1 > BiocCheck:::checkDESCRIPTIONFile("~/bioc/tpSVG/")
* Checking License: for restrictive use...
* Checking for recommended DESCRIPTION fields...
* Checking for Bioconductor software dependencies...
Bioconductor dependencies found in Imports & Depends (62%).
* Checking for pinned package versions in DESCRIPTION... This suggests that there may be something different in the SPB... I would have to investigate more. |
Thank you very much! |
@boyiguo1 |
I just did. The warning message is still there with In addition, I saw there's a new error message
I'm not 100% sure if it is caused by updates in v1.39.16. I didn't had the error last build run where there's no significant change except I put a package from "Depends" to "Imports" (boyiguo1/tpSVG@89ee5a3). Thank you so much! |
Thanks Boyi @boyiguo1 |
I found the issue. It looks like there is a difference when the check is run on the tarball. |
Hi,
Thanks for creating and maintaining the package!
I recently experienced false positive warnings that relates to the check on Bioconductor sofware dependencies during Bioconductor Single Package Building.
In short, I tried "Imports" or "Depends" on Bioconductor packages, where the check kept prompt warning messages.
See more details via Bioconductor/Contributions#3264 (comment)
I don't see other issues mentioned this problem, and hence report here.
Thanks!
Best,
Boyi
The text was updated successfully, but these errors were encountered: