MS2extract

[DanielQuiroz97]

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• Repository: https://github.com/CooperstoneLab/MS2extract

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[bioc-issue-bot]

Hi @DanielQuiroz97

Thanks for submitting your package. We are taking a quick
look at it and you will hear back from us soon.

The DESCRIPTION file for this package is:

Package: MS2extract
Type: Package
Title: Targeted MS/MS Spectra Extraction for In-house Compound Library Creation
Version: 0.99.0
Date: 2023-10-13
Authors@R: c(
    person("Cristian", "Quiroz-Moreno",
 email = "cristianquirozd1997@gmail.com",
 role = c("aut", "cre"),
 comment = c(ORCID = "0000-0002-9069-9147") ),
    person("Jessica", "Cooperstone",
 email = "cooperstone.1@osu.edu",
 role = c("aut"),
 comment = c(ORCID = "0000-0001-7920-0088") )
 )
Maintainer: Cristian Quiroz-Moreno <cristianquirozd1997@gmail.com>
Description: A mass spectrometry toolbox with the objective of importing mass
   spectrometry data, and extracts the desired MS/MS spectra for in-house MS/MS
   compound library creation. Subsequently, users can export the spectra 
   in a .msp file format, as a resulting compound database for further use
   in compound identification tasks. It is worth to note that this package
   do not annotate mass spectrometry data.
License: MIT + file LICENSE
LazyData: true
RdMacros: Rdpack
biocViews: MassSpectrometry, Metabolomics
Depends:
     R (>= 4.2.0)
RoxygenNote: 7.2.3
Roxygen: list(markdown = TRUE)
Encoding: UTF-8
Imports: 
    cli,
    Rdpack,
    crayon,
    dplyr,
    ggplot2,
    ggpubr,
    ggrepel,
    magrittr,
    MSnbase,
    OrgMassSpecR,
    ProtGenerics,
    purrr,
    Rdisop,
    rlang,
    readxl,
    readr,
    ggsci
Suggests:
    knitr,
    rmarkdown,
    prettydoc,
    testthat (>= 3.0.0),
    Rcpp (>= 1.0.9),
    BiocStyle,
    RefManageR,
    sessioninfo
VignetteBuilder: knitr
Config/testthat/edition: 3
BugReports: https://github.com/CooperstoneLab/MS2extract/issues
URL: https://cooperstonelab.github.io/MS2extract/