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DESCRIPTION
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DESCRIPTION
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Package: GOstats
Title: Tools for manipulating GO and microarrays
Version: 2.71.0
Authors@R: c(
person("Robert", "Gentleman", role="aut"),
person("Seth", "Falcon", role="ctb"),
person("Robert", "Castelo", role="ctb"),
person("Sonali", "Kumari", role="ctb",
comment="Converted vignettes from Sweave to R Markdown / HTML."),
person("Dennis", "Ndubi", role="ctb",
comment="Converted GOstatsHyperG vignette from Sweave to R Markdown / HTML."),
person("Bioconductor Package Maintainer", role="cre",
email="maintainer@bioconductor.org"))
Description: A set of tools for interacting with GO and microarray
data. A variety of basic manipulation tools for graphs,
hypothesis testing and other simple calculations.
Depends: R (>= 2.10), Biobase (>= 1.15.29), Category (>= 2.43.2), graph
Imports: methods, stats, stats4, AnnotationDbi (>= 0.0.89),
GO.db (>= 1.13.0), RBGL,
annotate (>= 1.13.2), AnnotationForge,
Rgraphviz
Suggests: hgu95av2.db (>= 1.13.0), ALL,
multtest, genefilter, RColorBrewer, xtable, SparseM,
GSEABase, geneplotter, org.Hs.eg.db, RUnit, BiocGenerics, BiocStyle, knitr
License: Artistic-2.0
Collate: zzz.R AllClasses.R AllGenerics.R hyperGTest-methods.R
GOHyperGResult-accessors.R GOgraph.R GOhyptest.R hyperGtable.R
shortestPath.R triad.R OBOHyperGResult-accessors.R
biocViews: Annotation, GO, MultipleComparison, GeneExpression, Microarray,
Pathways, GeneSetEnrichment, GraphAndNetwork
VignetteBuilder: knitr