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import from GDS fails #5
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I see -- so is a temporary solution to downgrade GDSArray? |
I'm getting the same error. I have 1.18.0 installed, which biocmanager seems to think is the current version.
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Hi all. I am trying to import data from a VCF produced by GATK Haplotypecaller. The VarientExperiment constructor fails from both VCF or GDS. Reproduced with the GDS:
I get the same error when I use
showAvailable
.NOTE: This is a .gds file. But, github requires it has one of a set of extensions, hence the
.txt
. Just ignore that. I think it works just to add the extension, but I'm happy to share via email if it doesn't.all_recomb_results_all_wg_c8_minimal.gds.txt
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